source: general/genutils/graphviz.xml@ 6d85d2c1

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Last change on this file since 6d85d2c1 was 6d85d2c1, checked in by Andrew Benton <andy@…>, 12 years ago

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1<?xml version="1.0" encoding="ISO-8859-1"?>
2<!DOCTYPE sect1 PUBLIC "-//OASIS//DTD DocBook XML V4.5//EN"
3 "http://www.oasis-open.org/docbook/xml/4.5/docbookx.dtd" [
4 <!ENTITY % general-entities SYSTEM "../../general.ent">
5 %general-entities;
6
7 <!ENTITY graphviz-download-http "http://graphviz.org/pub/graphviz/stable/SOURCES/graphviz-&graphviz-version;.tar.gz">
8 <!ENTITY graphviz-download-ftp "&gentoo-ftp-repo;/graphviz-&graphviz-version;.tar.gz">
9 <!ENTITY graphviz-md5sum "6f45946fa622770c45609778c0a982ee">
10 <!ENTITY graphviz-size "17 MB">
11 <!ENTITY graphviz-buildsize "142 MB">
12 <!ENTITY graphviz-time "1.5 SBU">
13]>
14
15<sect1 id="graphviz" xreflabel="Graphviz-&graphviz-version;">
16 <?dbhtml filename="graphviz.html"?>
17
18 <sect1info>
19 <othername>$LastChangedBy$</othername>
20 <date>$Date$</date>
21 </sect1info>
22
23 <title>Graphviz-&graphviz-version;</title>
24
25 <indexterm zone="graphviz">
26 <primary sortas="a-Graphviz">Graphviz</primary>
27 </indexterm>
28
29 <sect2 role="package">
30 <title>Introduction to Graphviz</title>
31
32 <para>The <application>Graphviz</application> package contains graph
33 visualization software. Graph visualization is a way of representing
34 structural information as diagrams of abstract graphs and networks.
35 <application>Graphviz</application> has several main graph layout
36 programs. It also has web and interactive graphical interfaces, auxiliary
37 tools, libraries, and language bindings.</para>
38
39 <para>The <application>Graphviz</application> layout programs take
40 descriptions of graphs in a simple text language, and creates diagrams in
41 several useful formats such as images and SVG for web pages, Postscript for
42 inclusion in PDF or other documents, or as objects displayed in an
43 interactive graph browser. (Graphviz also supports GXL, an XML dialect.) In
44 practice, graphs are usually generated from external data sources, but they
45 can also be created and edited manually, either as raw text files or within
46 a graphical editor. (Graphviz was not intended to be a
47 <application>Visio</application> replacement, so it would probably be
48 frustrating to try to use it that way.)</para>
49
50 <para>This package is useful for automatic graph drawing which has many
51 important applications in software engineering, database and web design,
52 networking, and in visual interfaces for many other domains. Graphviz has
53 many useful features for concrete diagrams, such as options for colors,
54 fonts, tabular node layouts, line styles, hyperlinks, and custom
55 shapes.</para>
56
57 <bridgehead renderas="sect3">Package Information</bridgehead>
58 <itemizedlist spacing="compact">
59 <listitem>
60 <para>Download (HTTP): <ulink url="&graphviz-download-http;"/></para>
61 </listitem>
62 <listitem>
63 <para>Download (FTP): <ulink url="&graphviz-download-ftp;"/></para>
64 </listitem>
65 <listitem>
66 <para>Download MD5 sum: &graphviz-md5sum;</para>
67 </listitem>
68 <listitem>
69 <para>Download size: &graphviz-size;</para>
70 </listitem>
71 <listitem>
72 <para>Estimated disk space required: &graphviz-buildsize;</para>
73 </listitem>
74 <listitem>
75 <para>Estimated build time: &graphviz-time;</para>
76 </listitem>
77 </itemizedlist>
78
79 <!-- <bridgehead renderas="sect3">Additional Downloads</bridgehead>
80 <itemizedlist spacing="compact">
81 <listitem>
82 <para>Required patch: <ulink
83 url="&patch-root;/graphviz-&graphviz-version;-gd_fixes-1.patch"/></para>
84 </listitem>
85 </itemizedlist> -->
86
87 <bridgehead renderas="sect3">Graphviz Dependencies</bridgehead>
88
89 <bridgehead renderas="sect4">Optional</bridgehead>
90 <para role="optional"><!-- <xref linkend="pkgconfig"/>, -->
91 <xref linkend="expat"/>,
92 <xref linkend="freetype2"/>,
93 <xref linkend="fontconfig"/>,
94 <xref linkend="freeglut"/>,
95 <xref linkend="libpng"/>,
96 <xref linkend="x-window-system"/>,
97 <xref linkend="pango"/> (built with <application>cairo</application> support),
98 <xref linkend="gtk2"/>,
99 <xref linkend="libglade"/>,
100 <xref linkend="librsvg"/>,
101 <xref linkend="gs"/>,
102 <xref linkend="tcl"/>,
103 <xref linkend="tk"/>,
104 <ulink url="http://openil.sourceforge.net/projects.php">DevIL</ulink>,
105 <ulink url="http://sourceforge.net/projects/lasi/">libLASi</ulink>,
106 <ulink url="http://www.freedesktop.org/wiki/Software/glitz">glitz</ulink>,
107 <ulink url="http://www.libgd.org/">GD Library</ulink>,
108 <xref linkend="libjpeg"/> (only if using the internal source code copy
109 of the GD Library), and
110 <ulink url="http://www.perens.com/FreeSoftware/ElectricFence/">Electric Fence</ulink></para>
111
112 <bridgehead renderas="sect4">Optional
113 (to Build Language Bindings)</bridgehead>
114 <para role="optional"><ulink url="http://www.swig.org/">SWIG</ulink>
115 (<application>SWIG</application> must be installed or no bindings will be
116 built),
117 <xref linkend="guile"/>,
118 <xref linkend="icedtea6"/><!-- or <xref linkend="jdk"/>-->,
119 <xref linkend="php"/>,
120 <xref linkend="python2"/>,
121 <xref linkend="ruby"/>,
122 <xref linkend="tcl"/>,
123 C# (<ulink url="http://www.southern-storm.com.au/portable_net.html">DotGNU Portable.NET</ulink>
124 or <ulink url="http://www.mono-project.com/Main_Page">Mono</ulink>),
125 <ulink url="http://www.iolanguage.com/about/">Io</ulink>,
126 <ulink url="http://www.r-project.org/">R</ulink>,
127 <ulink url="http://www.lua.org/">Lua</ulink>, and
128 <ulink url="http://caml.inria.fr/ocaml/index.en.html">Objective Caml</ulink></para>
129
130 <para condition="html" role="usernotes">User Notes:
131 <ulink url="&blfs-wiki;/graphviz"/></para>
132
133 </sect2>
134
135 <sect2 role="installation">
136 <title>Installation of Graphviz</title>
137
138 <para>Install <application>Graphviz</application> by running the following
139 commands:</para>
140
141<screen><userinput>./configure --prefix=/usr &amp;&amp;
142make</userinput></screen>
143
144 <para>This package does not come with a test suite that provides
145 meaningful results.</para>
146
147 <para>Now, as the <systemitem class="username">root</systemitem> user:</para>
148
149<screen role="root"><userinput>make install</userinput></screen>
150
151 <para>If desired, create a symbolic link in the system documents directory
152 to the documentation installed in
153 <filename class='directory'>/usr/share/graphviz/doc</filename> using the
154 following command as the <systemitem class="username">root</systemitem>
155 user:</para>
156
157<screen role="root"><userinput>ln -v -s /usr/share/graphviz/doc \
158 /usr/share/doc/graphviz-&graphviz-version;</userinput></screen>
159
160 </sect2>
161
162 <sect2 role="configuration">
163 <title>Configuring Graphviz</title>
164
165 <sect3 id="graphviz-config">
166 <title>Config Files</title>
167 <para><filename>/usr/lib/graphviz/config</filename></para>
168
169 <indexterm zone="graphviz graphviz-config">
170 <primary sortas="e-usr-share-graphviz-config">/usr/share/graphviz/config</primary>
171 </indexterm>
172
173 </sect3>
174
175 <sect3><title>Configuration Information</title>
176
177 <para>There are no specific configuration requirements for
178 <application>Graphviz</application>. You may consider installing the
179 additional plugins and tools available from the download page at
180 <ulink url="http://www.graphviz.org/Download_source.php"/> for additional
181 capabilities. If additional plugins are installed, you can run
182 <command>dot_static -c</command> (as the
183 <systemitem class="username">root</systemitem> user) to update the
184 <filename>config</filename> file in
185 <filename class='directory'>/usr/lib/graphviz</filename>.</para>
186
187 </sect3>
188
189 </sect2>
190
191 <sect2 role="content">
192 <title>Contents</title>
193
194 <segmentedlist>
195 <segtitle>Installed Programs</segtitle>
196 <segtitle>Installed Libraries</segtitle>
197 <segtitle>Installed Directories</segtitle>
198
199 <seglistitem>
200 <seg>acyclic, bcomps, ccomps, circo, dijkstra, dot, dot2gxl,
201 dot_static, dotty, fdp, gc, gvcolor, gvpack, gvpr, gxl2dot, lefty,
202 lneato, nop, prune, sccmap, tred, twopi and unflatten</seg>
203 <seg>libagraph.{so,a}, libcdt.{so,a}, libexpr.{so,a}, libgraph.{so,a},
204 libpack.{so,a}, libpathplan.{so,a}, additional support libraries
205 and language bindings</seg>
206 <seg>/usr/include/graphviz, /usr/lib/graphviz and
207 /usr/share/graphviz</seg>
208 </seglistitem>
209 </segmentedlist>
210
211 <variablelist>
212 <bridgehead renderas="sect3">Short Descriptions</bridgehead>
213 <?dbfo list-presentation="list"?>
214 <?dbhtml list-presentation="table"?>
215
216 <varlistentry id="acyclic">
217 <term><command>acyclic</command></term>
218 <listitem>
219 <para>is a filter that takes a directed graph as input and outputs a
220 copy of the graph with sufficient edges reversed to make the graph
221 acyclic. The reversed edge inherits all of the attributes of the
222 original edge.</para>
223 <indexterm zone="graphviz acyclic">
224 <primary sortas="b-acyclic">acyclic</primary>
225 </indexterm>
226 </listitem>
227 </varlistentry>
228
229 <varlistentry id="bcomps">
230 <term><command>bcomps</command></term>
231 <listitem>
232 <para>decomposes graphs into their biconnected components, printing
233 the components to standard output.</para>
234 <indexterm zone="graphviz bcomps">
235 <primary sortas="b-bcomps">bcomps</primary>
236 </indexterm>
237 </listitem>
238 </varlistentry>
239
240 <varlistentry id="ccomps">
241 <term><command>ccomps</command></term>
242 <listitem>
243 <para>decomposes graphs into their connected components, printing the
244 components to standard output.</para>
245 <indexterm zone="graphviz ccomps">
246 <primary sortas="b-ccomps">ccomps</primary>
247 </indexterm>
248 </listitem>
249 </varlistentry>
250
251 <varlistentry id="circo">
252 <term><command>circo</command></term>
253 <listitem>
254 <para>draws graphs using a circular layout. The tool identifies
255 biconnected components and draws the nodes of the component on a
256 circle. The block-cutpoint tree is then laid out using a recursive
257 radial algorithm. Edge crossings within a circle are minimized by
258 placing as many edges on the circle's perimeter as possible. In
259 particular, if the component is outerplanar, the component will have
260 a planar layout.</para>
261 <indexterm zone="graphviz circo">
262 <primary sortas="b-circo">circo</primary>
263 </indexterm>
264 </listitem>
265 </varlistentry>
266
267 <varlistentry id="dijkstra">
268 <term><command>dijkstra</command></term>
269 <listitem>
270 <para>reads a stream of graphs and for each computes the distance of
271 every node from sourcenode.</para>
272 <indexterm zone="graphviz dijkstra">
273 <primary sortas="b-dijkstra">dijkstra</primary>
274 </indexterm>
275 </listitem>
276 </varlistentry>
277
278 <varlistentry id="dot">
279 <term><command>dot</command></term>
280 <listitem>
281 <para>draws directed graphs. It works well on DAGs and other graphs
282 that can be drawn as hierarchies. It reads attributed graph files and
283 writes drawings. By default, the output format dot is the input file
284 with layout coordinates appended.</para>
285 <indexterm zone="graphviz dot">
286 <primary sortas="b-dot">dot</primary>
287 </indexterm>
288 </listitem>
289 </varlistentry>
290
291 <varlistentry id="dot2gxl">
292 <term><command>dot2gxl</command></term>
293 <listitem>
294 <para>converts between graphs represented in GXL and in the DOT
295 language. Unless a conversion type is specified using a flag,
296 <command>gxl2dot</command> will deduce the type of conversion from
297 the suffix of the input file, a
298 <filename class='extension'>.dot</filename> suffix causing a
299 conversion from DOT to GXL, and a
300 <filename class='extension'>.gxl</filename> suffix causing a
301 conversion from GXL to DOT.</para>
302 <indexterm zone="graphviz dot2gxl">
303 <primary sortas="b-dot2gxl">dot2gxl</primary>
304 </indexterm>
305 </listitem>
306 </varlistentry>
307
308 <varlistentry id="dot_static">
309 <term><command>dot_static</command></term>
310 <listitem>
311 <para>is a version of <command>dot</command>that has all the
312 <application>Graphviz</application> libraries compiled
313 statically.</para>
314 <indexterm zone="graphviz dot_static">
315 <primary sortas="b-dot_static">dot_static</primary>
316 </indexterm>
317 </listitem>
318 </varlistentry>
319
320 <varlistentry id="dotty">
321 <term><command>dotty</command></term>
322 <listitem>
323 <para>is a graph editor for the X Window System. It may be run as a
324 standalone editor, or as a front end for applications that use
325 graphs. It can control multiple windows viewing different
326 graphs.</para>
327 <indexterm zone="graphviz dotty">
328 <primary sortas="b-dotty">dotty</primary>
329 </indexterm>
330 </listitem>
331 </varlistentry>
332
333 <varlistentry id="fdp">
334 <term><command>fdp</command></term>
335 <listitem>
336 <para>draws undirected graphs using a <quote>spring</quote> model. It
337 relies on a force-directed approach in the spirit of Fruchterman and
338 Reingold.</para>
339 <indexterm zone="graphviz fdp">
340 <primary sortas="b-fdp">fdp</primary>
341 </indexterm>
342 </listitem>
343 </varlistentry>
344
345 <varlistentry id="gc-graphviz">
346 <term><command>gc</command></term>
347 <listitem>
348 <para>is a graph analogue to <command>wc</command> in that it prints
349 to standard output the number of nodes, edges, connected components
350 or clusters contained in the input files. It also prints a total
351 count for all graphs if more than one graph is given.</para>
352 <indexterm zone="graphviz gc-graphviz">
353 <primary sortas="b-gc">gc</primary>
354 </indexterm>
355 </listitem>
356 </varlistentry>
357
358 <varlistentry id="gvcolor">
359 <term><command>gvcolor</command></term>
360 <listitem>
361 <para>is a filter that sets node colors from initial seed values.
362 Colors flow along edges from tail to head, and are averaged (as HSB
363 vectors) at nodes. The graph must already have been processed by
364 <command>dot</command>.</para>
365 <indexterm zone="graphviz gvcolor">
366 <primary sortas="b-gvcolor">gvcolor</primary>
367 </indexterm>
368 </listitem>
369 </varlistentry>
370
371 <varlistentry id="gvpack">
372 <term><command>gvpack</command></term>
373 <listitem>
374 <para>reads in a stream of graphs, combines the graphs into a single
375 layout, and produces a single graph serving as the union of the input
376 graphs. The input graphs must be in <command>dot</command> format, and
377 must have all necessary layout information.</para>
378 <indexterm zone="graphviz gvpack">
379 <primary sortas="b-gvpack">gvpack</primary>
380 </indexterm>
381 </listitem>
382 </varlistentry>
383
384 <varlistentry id="gvpr">
385 <term><command>gvpr</command></term>
386 <listitem>
387 <para>is a graph stream editor inspired by <command>awk</command>. It
388 copies input graphs to its output, possibly transforming their
389 structure and attributes, creating new graphs, or printing arbitrary
390 information.</para>
391 <indexterm zone="graphviz gvpr">
392 <primary sortas="b-gvpr">gvpr</primary>
393 </indexterm>
394 </listitem>
395 </varlistentry>
396
397 <varlistentry id="gxl2dot">
398 <term><command>gxl2dot</command></term>
399 <listitem>
400 <para>converts between graphs represented in GXL and in the DOT
401 language. Unless a conversion type is specified using a flag,
402 <command>gxl2dot</command> will deduce the type of conversion from
403 the suffix of the input file, a
404 <filename class='extension'>.dot</filename> suffix causing a
405 conversion from DOT to GXL, and a
406 <filename class='extension'>.gxl</filename> suffix causing a
407 conversion from GXL to DOT.</para>
408 <indexterm zone="graphviz gxl2dot">
409 <primary sortas="b-gxl2dot">gxl2dot</primary>
410 </indexterm>
411 </listitem>
412 </varlistentry>
413
414 <varlistentry id="lefty">
415 <term><command>lefty</command></term>
416 <listitem>
417 <para>is a two-view graphics editor for technical pictures.</para>
418 <indexterm zone="graphviz lefty">
419 <primary sortas="b-lefty">lefty</primary>
420 </indexterm>
421 </listitem>
422 </varlistentry>
423
424 <varlistentry id="lneato">
425 <term><command>lneato</command></term>
426 <listitem>
427 <para>is a graph editor for the X Window System. It may be run as a
428 standalone editor, or as a front end for applications that use
429 graphs. It can control multiple windows viewing different
430 graphs.</para>
431 <indexterm zone="graphviz lneato">
432 <primary sortas="b-lneato">lneato</primary>
433 </indexterm>
434 </listitem>
435 </varlistentry>
436
437 <varlistentry id="nop">
438 <term><command>nop</command></term>
439 <listitem>
440 <para>reads a stream of graphs and prints each in pretty-printed
441 (canonical) format on stdout. If no files are given, it reads from
442 stdin.</para>
443 <indexterm zone="graphviz nop">
444 <primary sortas="b-nop">nop</primary>
445 </indexterm>
446 </listitem>
447 </varlistentry>
448
449 <varlistentry id="prune">
450 <term><command>prune</command></term>
451 <listitem>
452 <para>reads directed graphs in the same format used by
453 <command>dot</command> and removes subgraphs rooted at nodes
454 specified on the command line via options. These nodes themselves
455 will not be removed, but can be given attributes so that they can be
456 easily located by a graph stream editor such as
457 <command>gpr</command>. <command>prune</command> correctly handles
458 cycles, loops and multi-edges.</para>
459 <indexterm zone="graphviz prune">
460 <primary sortas="b-prune">prune</primary>
461 </indexterm>
462 </listitem>
463 </varlistentry>
464
465 <varlistentry id="sccmap">
466 <term><command>sccmap</command></term>
467 <listitem>
468 <para>decomposes digraphs into strongly connected components and an
469 auxiliary map of the relationship between components. In this map,
470 each component is collapsed into a node. The resulting graphs are
471 printed to standard out. The number of nodes, edges and strongly
472 connected components are printed to standard error.
473 <command>sccmap</command> is a way of partitioning large graphs into
474 more manageable pieces.</para>
475 <indexterm zone="graphviz sccmap">
476 <primary sortas="b-sccmap">sccmap</primary>
477 </indexterm>
478 </listitem>
479 </varlistentry>
480
481 <varlistentry id="tred">
482 <term><command>tred</command></term>
483 <listitem>
484 <para>computes the transitive reduction of directed graphs, and
485 prints the resulting graphs to standard output. This removes edges
486 implied by transitivity. Nodes and subgraphs are not otherwise
487 affected. The <quote>meaning</quote> and validity of the reduced
488 graphs is application dependent. <command>tred</command> is
489 particularly useful as a preprocessor to <command>dot</command> to
490 reduce clutter in dense layouts.</para>
491 <indexterm zone="graphviz tred">
492 <primary sortas="b-tred">tred</primary>
493 </indexterm>
494 </listitem>
495 </varlistentry>
496
497 <varlistentry id="twopi">
498 <term><command>twopi</command></term>
499 <listitem>
500 <para>draws graphs using a radial layout. Basically, one node is
501 chosen as the center and put at the origin. The remaining nodes are
502 placed on a sequence of concentric circles centered about the origin,
503 each a fixed radial distance from the previous circle.</para>
504 <indexterm zone="graphviz twopi">
505 <primary sortas="b-twopi">twopi</primary>
506 </indexterm>
507 </listitem>
508 </varlistentry>
509
510 <varlistentry id="unflatten">
511 <term><command>unflatten</command></term>
512 <listitem>
513 <para>is a preprocessor to <command>dot</command> that is used to
514 improve the aspect ratio of graphs having many leaves or disconnected
515 nodes. The usual layout for such a graph is generally very wide or
516 tall. <command>unflatten</command> inserts invisible edges or adjusts
517 the minlen on edges to improve layout compaction.</para>
518 <indexterm zone="graphviz unflatten">
519 <primary sortas="b-unflatten">unflatten</primary>
520 </indexterm>
521 </listitem>
522 </varlistentry>
523
524 <varlistentry id="libagraph">
525 <term><filename class='libraryfile'>libagraph.{so,a}</filename></term>
526 <listitem>
527 <para>supports graph programming by maintaining graphs in memory and
528 reading and writing graph files. Graphs, nodes and edges may be
529 attributed with programmer-defined records and string name-value
530 pairs. Graphs are composed of nodes, edges, and nested subgraphs.
531 Internally, <filename class='libraryfile'>libagraph</filename>
532 depends extensively on
533 <filename class='libraryfile'>libcdt</filename> (formerly
534 <filename class='libraryfile'>libdict</filename>) for set
535 representation.</para>
536 <indexterm zone="graphviz libagraph">
537 <primary sortas="c-libagraph">libagraph.{so,a}</primary>
538 </indexterm>
539 </listitem>
540 </varlistentry>
541
542 <varlistentry id="libcdt">
543 <term><filename class='libraryfile'>libcdt.{so,a}</filename></term>
544 <listitem>
545 <para>manages run-time dictionaries using standard container data
546 types: unordered set/multiset, ordered set/multiset, list, stack,
547 and queue.</para>
548 <indexterm zone="graphviz libcdt">
549 <primary sortas="c-libcdt">libcdt.{so,a}</primary>
550 </indexterm>
551 </listitem>
552 </varlistentry>
553
554 <varlistentry id="libexpr">
555 <term><filename class='libraryfile'>libexpr.{so,a}</filename></term>
556 <listitem>
557 <para>is a C-like expression library.</para>
558 <indexterm zone="graphviz libexpr">
559 <primary sortas="c-libexpr">libexpr.{so,a}</primary>
560 </indexterm>
561 </listitem>
562 </varlistentry>
563
564 <varlistentry id="libgraph">
565 <term><filename class='libraryfile'>libgraph.{so,a}</filename></term>
566 <listitem>
567 <para>maintains directed and undirected attributed graphs in memory
568 and reads and writes graph files. Graphs are composed of nodes,
569 edges, and nested subgraphs. A subgraph may contain any nodes and
570 edges of its parents, and may be passed to any
571 <filename class='libraryfile'>libgraph</filename> function taking a
572 graph pointer, except the three that create new attributes (where a
573 main graph is required).</para>
574 <indexterm zone="graphviz libgraph">
575 <primary sortas="c-libgraph">libgraph.{so,a}</primary>
576 </indexterm>
577 </listitem>
578 </varlistentry>
579
580 <varlistentry id="libpack">
581 <term><filename class='libraryfile'>libpack.{so,a}</filename></term>
582 <listitem>
583 <para>supports the use of connected components in the context of
584 laying out graphs using other <application>Graphviz</application>
585 libraries. One set of functions can be used to take a single graph
586 and break it apart into connected components. A complementary set of
587 functions takes a collection of graphs (not necessarily components of
588 a single graph) which have been laid out separately, and packs them
589 together moderately tightly. The packing is done using the polyomino
590 algorithm of K. Freivalds et al.</para>
591 <indexterm zone="graphviz libpack">
592 <primary sortas="c-libpack">libpack.{so,a}</primary>
593 </indexterm>
594 </listitem>
595 </varlistentry>
596
597 <varlistentry id="libpathplan">
598 <term><filename class='libraryfile'>libpathplan.{so,a}</filename></term>
599 <listitem>
600 <para>contains functions to find the shortest path between two points
601 in a simple polygon.</para>
602 <indexterm zone="graphviz libpathplan">
603 <primary sortas="c-libpathplan">libpathplan.{so,a}</primary>
604 </indexterm>
605 </listitem>
606 </varlistentry>
607
608 </variablelist>
609
610 </sect2>
611
612</sect1>
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